PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076261.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 349aa    MW: 36597.7 Da    PI: 6.9727
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.86.7e-37891932108
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 
                     ++ k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++  +++ +  +   s++++a++++
  XP_011076261.1  89 PPPKRSSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVsVNGTLKIPTTPTSATASAPETP 183
                     57799***********************************************************9999955522222222222222222222222 PP

             TCP  96 kskksqksaasal 108
                        +++++ as++
  XP_011076261.1 184 ---RKRRKRASNS 193
                     ...2222222223 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.6E-3094180IPR005333Transcription factor, TCP
PROSITE profilePS5136927.34295149IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0031347Biological Processregulation of defense response
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MASILPQHRH HHPTHHQNLE PREDDVSSAD PLLPNEYTIA AVDAVETDPS PPPPPSDGAP  60
LLKEEPSDME GSVQDGVSRA PETALVAAPP PKRSSKDRHT KVEGRGRRIR MPAACAARIF  120
QLTRELGHKS DGETIRWLLE RAEPAIIEAT GTGTVPAIAV SVNGTLKIPT TPTSATASAP  180
ETPRKRRKRA SNSEFYEVND ASSFAPVAPI APQGLVPVFP SGTFFMIPPT GGGAAGPSSQ  240
PQFWAIPATA TPVFNVAGRP ISNFVSFGGG NGGVSESEVG TNSNSGSGEK KGSRTMGGAA  300
SSSSSSMSTS TSATQMLRDF SLEIYDKREL QFMVGSASGN NNQTPSPKS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076261.10.0PREDICTED: transcription factor TCP9
SwissprotQ9LT892e-76TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A022QCR01e-136A0A022QCR0_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000623271e-116(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.22e-62TCP family protein